BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039H08LP1|AL430770
(532 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1105 1033 0.0
>3x_Contig1105
Length = 3123
Score = 1033 bits (520), Expect = 0.0
Identities = 528/530 (99%), Gaps = 1/530 (0%)
Strand = Plus / Minus
Query: 2 agcacctgaaagataataagataatagtatttaataaaggtaattctgtaggttgtacag 61
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2938 agcacctgaa-gataataagataatagtatttaataaaggtaattctgtaggttgtacag 2880
Query: 62 cttgaataccaactggaggtcatacaccacctaattcaatattagggctcatagctgaat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2879 cttgaataccaactggaggtcatacaccacctaattcaatattagggctcatagctgaat 2820
Query: 122 ggaaataagctcagaataatgcagcgaaaattaaaatttctgatactacgaataataaga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819 ggaaataagctcagaataatgcagcgaaaattaaaatttctgatactacgaataataaga 2760
Query: 182 aacctaaattaataccttttctaacagcaattgtatgatctcctaaatatgttgcttcag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2759 aacctaaattaataccttttctaacagcaattgtatgatctcctaaatatgttgcttcag 2700
Query: 242 caataatatctctaaatcataatgtagcacttaatgttactgttaaaattgataaataaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2699 caataatatctctaaatcataatgtagcacttaatgttactgttaaaattgataaataaa 2640
Query: 302 ttaaatacatatgtccaatatatccatgcatagttaaagctaatgataatgctaatgaca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2639 ttaaatacatatgtccaatatatccatgcatagttaaagctaatgataatgctaatgaca 2580
Query: 362 ttaatgcaaatgatactacaattggtcatggtgatggagctactaaatgaaagggaaatt 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2579 ttaatgcaaatgatactacaattggtcatggtgatggagctactaaatgaaagggaaatt 2520
Query: 422 gttgatgtctacttctttctaaatgtgtcataaatattttkataatctatacatttataa 481
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2519 gttgatgtctacttctttctaaatgtgtcataaatatttttataatctatacatttataa 2460
Query: 482 atttaaatgttaatttaatttatagaaataatattacttaatatatatat 531
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2459 atttaaatgttaatttaatttatagaaataatattacttaatatatatat 2410
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5109
Number of Sequences: 1807
Number of extensions: 5109
Number of successful extensions: 118
Number of sequences better than 1.0e-20: 1
length of query: 532
length of database: 10,358,551
effective HSP length: 16
effective length of query: 516
effective length of database: 10,329,639
effective search space: 5330093724
effective search space used: 5330093724
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)